Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_0405PFAM: Rhodanese-like; KEGG: rpa:RPA3613 putative thiosulfate sulfurtransferase. (284 aa)    
Predicted Functional Partners:
Meso_1782
PFAM: aminotransferase, class V; KEGG: mlo:mlr0015 nitrogenase cofactor synthesis protein nifS.
   
 0.913
Meso_3991
PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region; KEGG: mlo:mll3230 sulfite reductase hemoprotein subunit.
    
 0.913
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.911
Meso_1830
PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB0642 NADPH-dependent FMN reductase.
     
  0.900
Meso_1852
PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_PC00012 probable NAD(P)H-dependent FMN reductase protein.
     
  0.900
Meso_2107
PFAM: aminotransferase, class I and II; KEGG: mlo:mlr2541 aspartate aminotransferase A.
     
  0.900
Meso_2920
DoxX; PFAM: DoxX; KEGG: sco:SCO0201 integral membrane protein SCJ1213c.
     
  0.900
Meso_3626
PFAM: aminotransferase, class I and II; KEGG: sme:SMc04386 aspartate aminotransferase B protein.
     
  0.900
Meso_3711
PFAM: NADPH-dependent FMN reductase; KEGG: sma:SAV3813 putative NADPH-dependent FMN reductase.
     
  0.900
Meso_1424
PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mlo:mlr0353 O-acetylserine (thiol) lyase.
  
 
 0.833
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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