Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0410PFAM: Xylose isomerase-like TIM barrel; KEGG: ppu:PP2603 hypothetical protein. (285 aa)    
Predicted Functional Partners:
Meso_0413
PFAM: NIPSNAP domain containing protein; KEGG: bja:bll3657 hypothetical protein.
 
     0.773
Meso_2292
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like; KEGG: rpb:RPB_3090 fumarate reductase/succinate dehydrogenase flavoprotein.
 
     0.747
Meso_0782
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase Xylose isomerase-like TIM barrel; KEGG: ret:RHE_PC00215 putative 4-hydroxyphenylpyruvate dioxygenase protein.
 
   
 0.695
Meso_0411
PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bja:bll6359 putative oxidoreductase protein.
       0.671
Meso_0412
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.618
Meso_0409
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: psp:PSPPH_2974 D-isomer specific 2-hydroxyacid dehydrogenase family protein.
 
     0.536
Meso_0482
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like FAD dependent oxidoreductase; KEGG: gme:Gmet_1533 fumarate reductase/succinate dehydrogenase flavoprotein-like.
 
     0.485
Meso_3703
5-dehydro-2-deoxygluconokinase; PFAM: PfkB; KEGG: plu:plu1801 unnamed protein product; similar to myo-inositol catabolism protein IolC of Bacillus subtilis; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.479
Meso_2959
PFAM: NIPSNAP domain containing protein; KEGG: bja:bll3657 hypothetical protein.
 
     0.463
Meso_0455
5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB region; KEGG: atc:AGR_L_719 putative myo-inositol catabolism protein.
  
  
 0.451
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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