Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0451Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (336 aa)    
Predicted Functional Partners:
Meso_0843
Galactose 1-dehydrogenase; PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: sme:SMc00588 putative D-galactose 1-dehydrogenase protein.
  
 
 0.917
glk
TIGRFAM: glucokinase; PFAM: Glucokinase; KEGG: mlo:mlr4640 glucokinase (glk); Belongs to the bacterial glucokinase family.
    
 0.914
Meso_3587
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr4741 short chain dehydrogenase/reductase.
     
 0.900
Meso_0777
TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase NmrA-like Male sterility-like; KEGG: mlo:mlr5697 UDP-galactose 4-epimerase.
 
  
 0.796
Meso_0450
PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: mlo:mll3361 hypothetical protein.
 
  
 0.678
xylA
TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; KEGG: mlo:mlr5036 xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.627
Meso_0449
PFAM: AP endonuclease 2-like Xylose isomerase-like TIM barrel; KEGG: mlo:mll3362 hypothetical protein.
 
     0.583
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mlo:mlr5033 xylulokinase.
 
  
 0.505
Meso_0846
PFAM: KDPG and KHG aldolase; KEGG: sme:SMc00882 putative KHG/KDPG aldolase protein.
 
   
 0.481
Meso_3115
PFAM: ROK domain containing protein; KEGG: mlo:mlr3714 Xyl repressor.
 
   
 0.414
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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