Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0458PFAM: OsmC-like protein; KEGG: sme:SMb21303 hypothetical membrane-anchored protein. (155 aa)    
Predicted Functional Partners:
Meso_0995
PFAM: Xylose isomerase-like TIM barrel; KEGG: sme:SMc03130 hypothetical protein.
  
     0.466
Meso_1188
Hypothetical protein; KEGG: ecj:JW1344 exonuclease VIII, 5' -> 3' specific dsDNA exonuclease.
  
     0.444
Meso_0459
PFAM: extracellular solute-binding protein, family 5; KEGG: pac:PPA1277 ABC transporter, substrate binding protein.
       0.438
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.