STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0459PFAM: extracellular solute-binding protein, family 5; KEGG: pac:PPA1277 ABC transporter, substrate binding protein. (504 aa)    
Predicted Functional Partners:
Meso_0461
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdi:DIP1742 putative oligopeptide ABC transport system membrane protein.
 
   0.907
Meso_0460
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lxx:Lxx19250 ABC transporter, permease protein.
   0.901
Meso_1311
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1189 permease protein of oligopeptide ABC transporter.
  
   0.781
Meso_2633
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2835 dipeptide ABC transporter, periplasmic dipeptide-binding protein.
  
  
  0.742
Meso_1312
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1187 permease protein of oligopeptide ABC transporter.
 
   0.711
Meso_0462
PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx19230 ABC transporter, ATP-binding protein.
 
    0.657
Meso_0463
PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx19220 oligopeptide porter; Belongs to the ABC transporter superfamily.
 
    0.642
Meso_3737
PFAM: extracellular solute-binding protein, family 5; KEGG: reu:Reut_A3006 extracellular solute-binding protein, family 5.
  
  
 
0.538
Meso_2648
PFAM: extracellular solute-binding protein, family 5; KEGG: reu:Reut_A1926 extracellular solute-binding protein, family 5.
  
  
 
0.534
Meso_1950
PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMa1438 putative ABC transporter, periplasmic solute-binding protein.
  
  
 
0.532
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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