Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0463PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx19220 oligopeptide porter; Belongs to the ABC transporter superfamily. (249 aa)    
Predicted Functional Partners:
Meso_0461
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdi:DIP1742 putative oligopeptide ABC transport system membrane protein.
 
  0.917
Meso_0460
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lxx:Lxx19250 ABC transporter, permease protein.
 
 
  0.886
Meso_0462
PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx19230 ABC transporter, ATP-binding protein.
 
 
 
0.831
Meso_0561
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1882 putative integral membrane transport protein.
 
  0.685
Meso_0459
PFAM: extracellular solute-binding protein, family 5; KEGG: pac:PPA1277 ABC transporter, substrate binding protein.
 
 
  0.682
ccmA
Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
  
  0.651
Meso_4082
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll5491 peptide ABC transporter, permease protein.
  
 
 0.605
Meso_1833
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1631 ABC transporter, permease protein.
 
  0.585
Meso_3633
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH130 oligopeptide ABC transporter permease protein.
 
  0.583
Meso_2406
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_4129 binding-protein-dependent transport systems inner membrane component.
 
  0.568
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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