Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Meso_0566PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_C6645 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)    
Predicted Functional Partners:
Meso_0160
Gamma-glutamylputrescine oxidase; PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll6520 oxidoreductase.
  
 
  0.923
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.885
Meso_0565
PFAM: GCN5-related N-acetyltransferase.
       0.773
Meso_0564
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mac:MA1318 argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
       0.757
Meso_0567
PFAM: FAD dependent oxidoreductase; KEGG: sil:SPOA0380 hypothetical protein.
 
    0.751
Meso_0560
PFAM: ABC transporter related; SMART: ATPase; KEGG: bja:bll1209 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.539
Meso_0561
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1882 putative integral membrane transport protein.
       0.539
Meso_0562
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1650 binding-protein-dependent transport systems inner membrane component.
       0.539
Meso_0563
PFAM: extracellular solute-binding protein, family 5; KEGG: bpa:BPP2435 putative solute-binding transport protein (periplasmic).
       0.539
Meso_0568
Transcriptional regulator, GntR family; PFAM: GCN5-related N-acetyltransferase regulatory protein GntR, HTH GntR-like; KEGG: reu:Reut_B5875 regulatory protein GntR, HTH:GntR, C-terminal.
       0.485
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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