Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0581PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: bja:blr2218 putative xanthine dehydrogenase. (329 aa)    
Predicted Functional Partners:
Meso_0580
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: reu:Reut_B4507 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead:aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 0.999
Meso_0582
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: mlo:mlr1925 oxidoreductase, iron-sulphur binding subunit.
 
 0.999
Meso_0474
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mbo:Mb0380c probable carbon monoxyde dehydrogenase (large chain).
 
 0.958
Meso_0058
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: mlo:mll1129 carbon-monoxide dehydrogenase small subunit.
 
 0.954
Meso_0907
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mlo:mlr7702 putative dehydrogenase.
 
 0.931
Meso_0472
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: pai:PAE1936 carbon monoxide dehydrogenase small subunit, conjectural.
 
 0.927
Meso_2834
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mlo:mlr5135 xanthine dehydrogenase, xdhB.
 
  
  0.927
Meso_1906
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: sme:SMb20403 putative oxidoreductase subunit protein.
 
 0.921
Meso_0059
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mlo:mll1128 carbon-monoxide dehydrogenase large subunit.
 
 0.920
Meso_2833
PFAM: ferredoxin molybdopterin dehydrogenase, FAD-binding [2Fe-2S]-binding CO dehydrogenase flavoprotein-like; KEGG: mlo:mlr5134 xanthine dehydrogenase, xdhA.
 
  
 
0.914
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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