Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0652PFAM: polysaccharide export protein; KEGG: mlo:mll5251 exopolysaccharide production protein exoF. (427 aa)    
Predicted Functional Partners:
Meso_0660
TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis; KEGG: mlo:mlr5276 exopolysaccharide polymerization protein, succinoglycan biosynthesis transport protein ExoP.
 
 
 0.975
Meso_2592
PFAM: lipopolysaccharide biosynthesis; KEGG: ret:RHE_CH03233 exopolysaccharide polymerization protein.
 
 
 0.963
Meso_1157
TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis; KEGG: mlo:mlr8439 succinoglycan transport protein ExoP.
 
 
 0.956
Meso_2874
PFAM: lipopolysaccharide biosynthesis; KEGG: sme:SMb21506 putative auxiliar protein involved in export of cell surface polysaccharides, MPA1 family without cytosolic domain, slightly ExoP-like.
 
 
 0.947
Meso_0651
PFAM: O-antigen polymerase; KEGG: rsp:RSP_2549 putative polysaccharide polymerase.
 
  
 0.876
Meso_0657
PFAM: glycosyl transferase, family 2; KEGG: mlo:mlr5272 glycosyltransferase, SUCCINOGLYCAN BIOSYNTHESIS PROTEIN EXOA.
 
  
 0.873
Meso_0656
KEGG: mlo:mlr5271 glycosyltransferase, SUCCINOGLYCAN BIOSYNTHESIS PROTEIN EXOL.
 
  
 0.823
Meso_2069
PFAM: OmpA/MotB; KEGG: mlo:mlr2412 hypothetical protein.
  
 0.810
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
  
  
 0.764
Meso_0648
PFAM: glycoside hydrolase, family 16; KEGG: mlo:mlr5264 endo-1,3-1,4-beta-glycanase ExoK.
 
   
 0.757
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.