Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Experiments
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[Homology]
Score
Meso_0694PFAM: cell wall hydrolase, SleB; KEGG: mlo:mlr7408 hypothetical protein. (377 aa)    
Predicted Functional Partners:
Meso_0695
Conserved hypothetical protein; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
 
     0.570
Meso_3165
PFAM: porin, opacity type; KEGG: mlo:mll3878 hypothetical protein.
  
     0.565
Meso_3019
KEGG: mlo:mlr3471 hypothetical protein.
  
     0.509
Meso_0717
KEGG: mlo:mlr7441 hypothetical protein.
  
     0.499
Meso_0426
KEGG: mlo:mlr8251 hypothetical protein.
  
     0.468
Meso_3510
KEGG: sme:SMb21362 hypothetical membrane-anchored protein.
  
     0.456
Meso_1542
PFAM: Mammalian cell entry related; KEGG: mlo:mll0798 putative ABC transport system substrate-bindin protein.
  
     0.429
Meso_2994
PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mlo:mll3427 hypothetical protein.
  
     0.428
Meso_0693
PFAM: OsmC-like protein; KEGG: bja:blr0920 hypothetical protein.
       0.420
atpB
ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
       0.419
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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