Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Meso_0720 | Meso_0721 | Meso_0720 | Meso_0721 | PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein. | KEGG: sme:SMc02859 hypothetical protein. | 0.953 |
Meso_0720 | Meso_1466 | Meso_0720 | Meso_1466 | PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein. | KEGG: sme:SMc01562 hypothetical protein. | 0.550 |
Meso_0720 | purD | Meso_0720 | Meso_0719 | PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein. | TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase protein of unknown function DUF201; KEGG: mlo:mlr7447 phosphoribosylamine-glycine ligase; Belongs to the GARS family. | 0.476 |
Meso_0721 | Meso_0720 | Meso_0721 | Meso_0720 | KEGG: sme:SMc02859 hypothetical protein. | PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein. | 0.953 |
Meso_0721 | Meso_1466 | Meso_0721 | Meso_1466 | KEGG: sme:SMc02859 hypothetical protein. | KEGG: sme:SMc01562 hypothetical protein. | 0.456 |
Meso_0721 | purD | Meso_0721 | Meso_0719 | KEGG: sme:SMc02859 hypothetical protein. | TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase protein of unknown function DUF201; KEGG: mlo:mlr7447 phosphoribosylamine-glycine ligase; Belongs to the GARS family. | 0.476 |
Meso_1466 | Meso_0720 | Meso_1466 | Meso_0720 | KEGG: sme:SMc01562 hypothetical protein. | PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein. | 0.550 |
Meso_1466 | Meso_0721 | Meso_1466 | Meso_0721 | KEGG: sme:SMc01562 hypothetical protein. | KEGG: sme:SMc02859 hypothetical protein. | 0.456 |
purD | Meso_0720 | Meso_0719 | Meso_0720 | TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase protein of unknown function DUF201; KEGG: mlo:mlr7447 phosphoribosylamine-glycine ligase; Belongs to the GARS family. | PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein. | 0.476 |
purD | Meso_0721 | Meso_0719 | Meso_0721 | TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase protein of unknown function DUF201; KEGG: mlo:mlr7447 phosphoribosylamine-glycine ligase; Belongs to the GARS family. | KEGG: sme:SMc02859 hypothetical protein. | 0.476 |