Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0752KEGG: mlo:mll7509 hypothetical protein. (267 aa)    
Predicted Functional Partners:
Meso_0751
Redoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
       0.674
Meso_0753
PFAM: protein of unknown function DUF179; KEGG: mlo:mlr7511 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.658
Meso_3663
PFAM: heat shock protein Hsp20; KEGG: mlo:mlr3192 small heat shock protein HspH; Belongs to the small heat shock protein (HSP20) family.
  
     0.621
Meso_3923
Transcriptional regulator, XRE family; PFAM: helix-turn-helix motif; KEGG: atc:AGR_C_630 hypothetical protein.
  
     0.566
Meso_3317
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: mlo:mlr4475 putative DNA polymerase III, delta subunit.
  
     0.504
Meso_3359
Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
  
     0.498
Meso_2749
PFAM: N-formylglutamate amidohydrolase; KEGG: mlo:mll3040 N-formylglutamate amidohydrolase.
  
     0.466
Meso_3362
TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin; KEGG: bmb:BruAb1_0095 CycY, thiol:disulfide interchange protein, thioredoxin family.
 
  
 0.424
Meso_3081
PFAM: Methyltransferase type 11; KEGG: mlo:mll3545 hypothetical protein.
  
     0.406
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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