Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0795Histidine kinase; PFAM: ATP-binding region, ATPase-like; KEGG: sme:SMb21519 putative two-component sensor histidine kinase protein. (494 aa)    
Predicted Functional Partners:
Meso_0797
PFAM: response regulator receiver; KEGG: ret:RHE_CH01734 probable two-component response regulator protein.
 
 
 0.872
Meso_0596
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR response regulator receiver sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: sme:SMa1550 putative response regulator of two-component system.
 
 
 0.815
Meso_2574
PFAM: regulatory protein, LuxR; KEGG: ret:RHE_CH01362 probable two-component response regulator protein.
 
 
 0.812
Meso_0341
PFAM: regulatory protein, LuxR response regulator receiver; KEGG: bja:blr7015 two-component response regulator.
 
 
 0.795
Meso_0091
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR response regulator receiver Sigma-70, region 4 type 2; KEGG: mlo:mlr5684 two-component system, response regulator.
 
 
 0.733
Meso_0796
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Helix-turn-helix, type 11; KEGG: ttj:TTHA1352 response regulator.
 
 
 0.703
Meso_2457
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Tetratricopeptide TPR_4; KEGG: sco:SCO5506 regulatory protein.
 
 
 0.653
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
  
 
 0.630
Meso_1854
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Sigma-70, region 4 type 2; KEGG: mta:Moth_0212 AroM.
 
 
 0.614
Meso_1904
KEGG: ret:RHE_PE00024 probable two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif.
 
 
 0.574
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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