STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0807PFAM: ABC transporter related; SMART: ATPase; KEGG: sth:STH874 sulfate ABC transporter ATP-binding protein. (269 aa)    
Predicted Functional Partners:
Meso_0808
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02345 putative transport system permease ABC transporter protein.
 
 0.950
Meso_0809
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02345 putative transport system permease ABC transporter protein.
 
 0.949
Meso_3539
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG10657 aliphatic sulfonates transport system permease protein.
 
 0.882
Meso_2078
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2598 ABC transporter, inner membrane subunit.
 
 0.881
Meso_3540
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6089 ABC transporter permease protein.
 
 0.879
Meso_2962
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1306 ABC transporter, permease component.
 
 0.875
Meso_0814
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA3512 putative sulfonate transport system permease protein.
 
 0.864
Meso_0806
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: mlo:mll6979 ABC transporter, periplasmic substrate-binding protein.
 
 0.829
Meso_3542
PFAM: NLPA lipoprotein; KEGG: tcx:Tcr_1800 NlpA lipoprotein.
 
 0.775
Meso_2046
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01826 putative permease ABC transporter protein.
 
 0.751
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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