Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0809PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02345 putative transport system permease ABC transporter protein. (277 aa)    
Predicted Functional Partners:
Meso_0807
PFAM: ABC transporter related; SMART: ATPase; KEGG: sth:STH874 sulfate ABC transporter ATP-binding protein.
 
 0.949
Meso_3542
PFAM: NLPA lipoprotein; KEGG: tcx:Tcr_1800 NlpA lipoprotein.
 
 0.909
Meso_2080
PFAM: ABC transporter related; SMART: ATPase; KEGG: rsp:RSP_2596 ABC transporter, ATPase subunit.
 
 0.897
Meso_3541
PFAM: ABC transporter related; SMART: ATPase; KEGG: bbr:BB1072 ATP-binding component of ABC transporter.
 
 0.895
Meso_0816
PFAM: ABC transporter related; SMART: ATPase; KEGG: pae:PA3514 putative sulfonate transport system ATP-binding protein.
 
 0.889
Meso_2961
PFAM: ABC transporter related; SMART: ATPase; KEGG: tfu:Tfu_1305 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component.
 
 0.877
Meso_0808
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02345 putative transport system permease ABC transporter protein.
 
 
 
0.868
Meso_0806
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: mlo:mll6979 ABC transporter, periplasmic substrate-binding protein.
 
 0.837
Meso_2044
PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMc01823 putative ATP-binding ABC transporter protein.
 
 0.826
Meso_0815
KEGG: pae:PA3513 putative sulfonate transport system substrate-binding protein.
 
 0.771
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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