Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0813PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: reu:Reut_B3601 salicylate 1-monooxygenase. (377 aa)    
Predicted Functional Partners:
Meso_0821
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sco:SCO6304 oxidoreductase.
 
   
 0.756
Meso_0819
PFAM: Cupin 2, conserved barrel; KEGG: aci:ACIAD0993 hypothetical protein.
 
   
 0.749
Meso_0823
PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family.
 
     0.700
Meso_2428
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sil:SPO0833 formate dehydrogenase, beta subunit.
   
 
 0.699
Meso_0814
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA3512 putative sulfonate transport system permease protein.
 
     0.696
Meso_3284
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: jan:Jann_3769 monooxygenase, FAD-binding.
  
   
 0.696
Meso_0815
KEGG: pae:PA3513 putative sulfonate transport system substrate-binding protein.
 
     0.668
Meso_0822
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pae:PA3507 short chain dehydrogenase.
 
   0.661
Meso_0820
PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II1498 hydrolase, alpha/beta fold family.
 
 0.651
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.617
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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