Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0817Hypothetical protein. (99 aa)    
Predicted Functional Partners:
Meso_0816
PFAM: ABC transporter related; SMART: ATPase; KEGG: pae:PA3514 putative sulfonate transport system ATP-binding protein.
       0.773
Meso_0815
KEGG: pae:PA3513 putative sulfonate transport system substrate-binding protein.
       0.661
Meso_0814
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA3512 putative sulfonate transport system permease protein.
       0.504
Meso_0818
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR; KEGG: reu:Reut_B3600 regulatory protein, IclR.
       0.457
Meso_0813
PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: reu:Reut_B3601 salicylate 1-monooxygenase.
       0.407
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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