Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0832PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mlo:mll7579 probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (393 aa)    
Predicted Functional Partners:
Meso_2218
Oxidoreductase-like protein; PFAM: Semialdehyde dehydrogenase, NAD - binding oxidoreductase-like Oxidoreductase-like; KEGG: mlo:mll2825 probable oxidoreductase.
  
 0.926
Meso_0779
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD Male sterility-like; KEGG: bms:BR0510 epimerase/dehydratase, putative.
 
  
 0.884
Meso_1154
PFAM: sugar transferase; KEGG: mlo:mll8435 probable glycosyl transferase.
  
  
 0.857
Meso_0487
PFAM: UDP-glucose/GDP-mannose dehydrogenase 6-phosphogluconate dehydrogenase, NAD-binding 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: ret:RHE_PE00044 probable UDP-glucose 6-dehydrogenase/GDP-mannose 6-dehydrogenase protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.798
Meso_0831
Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: pca:Pcar_1779 phosphomannomutase.
  
  
 0.583
Meso_0492
PFAM: glycosyl transferase, group 1; KEGG: pmi:PMT9312_1301 glycosyltransferase-like.
 
  
 0.567
Meso_1957
PFAM: oxidoreductase-like Oxidoreductase-like homoserine dehydrogenase, NAD-binding; KEGG: rba:RB6199 dehydrogenase homolog.
 
  
 0.561
Meso_0456
Mannose-6-phosphate isomerase, type 2; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II Nucleotidyl transferase Cupin 2, conserved barrel; KEGG: bms:BRA0347 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.527
cysN
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.506
Meso_0778
PFAM: sugar transferase; KEGG: mlo:mlr7570 glycosyltransferase.
  
 0.501
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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