Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0838Multiple monosaccharide-binding protein; KEGG: sme:SMb20895 probable sugar uptake ABC transporter periplasmic solute-binding protein precursor. (355 aa)    
Predicted Functional Partners:
Meso_0840
Multiple monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: atc:AGR_C_4262 membrane-spanning permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
Meso_0839
PFAM: ABC transporter related; SMART: ATPase; KEGG: atu:Atu2347 ABC transporter, nucleotide binding/ATPase protein [sugar].
 
 0.989
Meso_3113
PFAM: inner-membrane translocator; KEGG: mlo:mll3711 xylose transport permease protein xylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.805
Meso_0837
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: atc:AGR_C_4269 probable transcriptional regulator.
 
     0.642
Meso_0841
PFAM: protein of unknown function DUF1238; KEGG: mlo:mll5655 hypothetical protein.
 
   
 0.566
Meso_0843
Galactose 1-dehydrogenase; PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: sme:SMc00588 putative D-galactose 1-dehydrogenase protein.
 
     0.545
Meso_3112
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll3710 ABC-transport system ATP binding protein; TC 3.A.1.2.-.
 
 
 0.443
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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