Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0843Galactose 1-dehydrogenase; PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: sme:SMc00588 putative D-galactose 1-dehydrogenase protein. (310 aa)    
Predicted Functional Partners:
Meso_0451
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.917
Meso_3587
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr4741 short chain dehydrogenase/reductase.
     
  0.900
Meso_0845
PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: atc:AGR_C_1271 2-dehydro-3-deoxygalactonokinase.
 
   
 0.869
Meso_0844
PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20262 putative semialdehyde dehydrogenase protein.
 
    0.772
Meso_0846
PFAM: KDPG and KHG aldolase; KEGG: sme:SMc00882 putative KHG/KDPG aldolase protein.
 
  
 0.758
Meso_0841
PFAM: protein of unknown function DUF1238; KEGG: mlo:mll5655 hypothetical protein.
 
    0.738
Meso_0842
Dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: ret:RHE_CH03160 dihydroxy-acid dehydratase protein; Belongs to the IlvD/Edd family.
 
  
 0.702
Meso_3588
PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: bme:BMEI1997 gluconolactonase.
 
  
 0.565
Meso_0838
Multiple monosaccharide-binding protein; KEGG: sme:SMb20895 probable sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
     0.545
Meso_0840
Multiple monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: atc:AGR_C_4262 membrane-spanning permease; Belongs to the binding-protein-dependent transport system permease family.
 
     0.511
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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