Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_0883TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51 penicillin-binding protein, transpeptidase; KEGG: mlo:mll7657 penicillin-binding protein. (714 aa)    
Predicted Functional Partners:
Meso_2013
PFAM: penicillin-binding protein, transpeptidase Penicillin-binding protein, dimerisation domain; KEGG: mlo:mll1561 penicillin-binding protein.
 
 
 
 0.856
Meso_1812
PFAM: Sporulation related; KEGG: bme:BMEI1088 soluble lytic murein transglycosylase.
 
 
 
 0.714
Meso_2008
TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mlo:mll1555 cell division protein; Belongs to the SEDS family.
 
 
 
 0.699
Meso_1788
PFAM: peptidase M23B; KEGG: mlo:mll8577 hypothetical protein.
  
   
 0.683
Meso_0882
PFAM: protein of unknown function DUF1214; KEGG: mlo:mll7656 hypothetical protein.
 
     0.664
Meso_0881
KEGG: mlo:mll7655 hypothetical protein.
 
     0.663
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.649
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.641
Meso_2993
PFAM: peptidase M23B; KEGG: bms:BR1861 peptidase, M23/M37 family.
  
   
 0.641
Meso_1800
Peptidase M23B; PFAM: Peptidoglycan-binding LysM peptidase M23B; KEGG: bmb:BruAb1_0900 peptidase, M23/M37 family.
  
   
 0.621
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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