Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0913PFAM: acyltransferase 3; KEGG: atc:AGR_C_4279 hypothetical protein. (384 aa)    
Predicted Functional Partners:
Meso_0912
PFAM: lipolytic enzyme, G-D-S-L; KEGG: cac:CAC0537 acetylxylan esterase, acyl-CoA esterase or GDSL lipase family, strong similarity to C-terminal region of endoglucanase E precursor.
     
 0.783
Meso_0660
TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis; KEGG: mlo:mlr5276 exopolysaccharide polymerization protein, succinoglycan biosynthesis transport protein ExoP.
 
   
 0.576
Meso_0911
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
       0.499
Meso_1554
PFAM: nuclease (SNase-like); KEGG: mlo:mll0560 succinoglycan biotynthesis protein ExoI.
  
  
 0.480
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.460
Meso_0485
PFAM: acyltransferase 3; KEGG: tfu:Tfu_1701 hypothetical protein.
  
     0.428
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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