Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_0975PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: bms:BR0442 ABC transporter, ATP-binding/permease protein. (626 aa)    
Predicted Functional Partners:
Meso_0974
PFAM: regulatory protein, ArsR; KEGG: mlo:mlr7816 transcriptional regulator.
       0.806
prfA
Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
  
  0.729
Meso_1781
Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD; KEGG: bmb:BruAb1_0940 hypothetical protein.
   
 0.704
Meso_1779
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD; KEGG: mlo:mlr0020 hypothetical protein.
   
 0.703
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.700
Meso_2174
PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMc00186 putative ABC transporter ATP-binding transmembrane protein.
  
 
0.606
Meso_3189
KEGG: mlo:mll3934 ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase.
  
 
0.598
Meso_2173
PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll2715 ATP-binding protein of ABC transporter.
  
 
0.578
Meso_3593
PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mlo:mlr4641 ABC transporter, ATP-binding protein.
  
 
0.576
Meso_2670
PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mlo:mll7118 ABC-transport protein, ATP-binding component.
  
 
0.568
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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