bpt protein (Chelativorans sp. BNC1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

bpt

arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (249 aa)

Predicted Functional Partners:

Meso_1377

0.667

Meso_1128

0.636

rnr

0.609

rph

0.467

clpS

0.461

Meso_1129

0.452

Meso_2535

0.439

Meso_2148

0.423

Meso_2429

0.423

Meso_0775

0.415

Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Meso_0775	bpt	Meso_0775	Meso_1127	PFAM: beta-lactamase-like; KEGG: mlo:mll7547 hypothetical protein.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.415
Meso_0775	rnr	Meso_0775	Meso_1353	PFAM: beta-lactamase-like; KEGG: mlo:mll7547 hypothetical protein.	RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.	0.436
Meso_1128	Meso_1129	Meso_1128	Meso_1129	PFAM: RDD domain containing protein; KEGG: mlo:mll8365 hypothetical protein.	Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mlo:mll8390 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	0.684
Meso_1128	bpt	Meso_1128	Meso_1127	PFAM: RDD domain containing protein; KEGG: mlo:mll8365 hypothetical protein.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.636
Meso_1129	Meso_1128	Meso_1129	Meso_1128	Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mlo:mll8390 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	PFAM: RDD domain containing protein; KEGG: mlo:mll8365 hypothetical protein.	0.684
Meso_1129	bpt	Meso_1129	Meso_1127	Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mlo:mll8390 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.452
Meso_1377	bpt	Meso_1377	Meso_1127	PFAM: protein of unknown function DUF482; KEGG: mlo:mlr0661 hypothetical protein.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.667
Meso_2148	bpt	Meso_2148	Meso_1127	KEGG: mlo:mll2674 hypothetical protein.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.423
Meso_2429	bpt	Meso_2429	Meso_1127	PFAM: SirA-like; KEGG: nwi:Nwi_0975 SirA-like protein; Belongs to the sulfur carrier protein TusA family.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.423
Meso_2535	bpt	Meso_2535	Meso_1127	PFAM: beta-lactamase-like; KEGG: xcv:XCV2445 putative metallo-beta-lactamase superfamily protein.	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	0.439
bpt	Meso_0775	Meso_1127	Meso_0775	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	PFAM: beta-lactamase-like; KEGG: mlo:mll7547 hypothetical protein.	0.415
bpt	Meso_1128	Meso_1127	Meso_1128	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	PFAM: RDD domain containing protein; KEGG: mlo:mll8365 hypothetical protein.	0.636
bpt	Meso_1129	Meso_1127	Meso_1129	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mlo:mll8390 delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	0.452
bpt	Meso_1377	Meso_1127	Meso_1377	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	PFAM: protein of unknown function DUF482; KEGG: mlo:mlr0661 hypothetical protein.	0.667
bpt	Meso_2148	Meso_1127	Meso_2148	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	KEGG: mlo:mll2674 hypothetical protein.	0.423
bpt	Meso_2429	Meso_1127	Meso_2429	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	PFAM: SirA-like; KEGG: nwi:Nwi_0975 SirA-like protein; Belongs to the sulfur carrier protein TusA family.	0.423
bpt	Meso_2535	Meso_1127	Meso_2535	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	PFAM: beta-lactamase-like; KEGG: xcv:XCV2445 putative metallo-beta-lactamase superfamily protein.	0.439
bpt	clpS	Meso_1127	Meso_1372	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.461
bpt	rnr	Meso_1127	Meso_1353	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.	0.609
bpt	rph	Meso_1127	Meso_4016	arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.	RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.	0.467

page 1 of 2

Server load: low (30%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About