Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1143PFAM: Ubiquinol-cytochrome C chaperone; KEGG: mlo:mlr8420 hypothetical protein. (182 aa)    
Predicted Functional Partners:
Meso_1144
KEGG: bmb:BruAb1_0790 hypothetical protein.
 
     0.870
Meso_1142
PFAM: SmpA/OmlA; KEGG: mlo:mll8419 hypothetical protein.
 
     0.689
plsX
Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
       0.600
Meso_3488
Transcriptional regulator, XRE family; PFAM: helix-turn-helix motif; KEGG: mlo:mlr4548 transcriptional regulator.
  
     0.579
fabH
3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
       0.549
Meso_1570
KEGG: mlo:mll1106 hypothetical protein.
  
     0.538
Meso_2074
PFAM: protein of unknown function DUF983; KEGG: ret:RHE_CH01276 hypothetical protein.
  
     0.500
Meso_2115
KEGG: ath:At1g64980 expressed protein.
  
     0.478
ihfA
Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.465
Meso_2029
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: mlo:mll1589 transcriptional regulator.
  
     0.458
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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