Meso_1144 protein (Chelativorans sp. BNC1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Assay-based Predictions

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

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Your Current Organism:

Chelativorans sp. BNC1

NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Meso_1143	Meso_1144	Meso_1143	Meso_1144	PFAM: Ubiquinol-cytochrome C chaperone; KEGG: mlo:mlr8420 hypothetical protein.	KEGG: bmb:BruAb1_0790 hypothetical protein.	0.870
Meso_1144	Meso_1143	Meso_1144	Meso_1143	KEGG: bmb:BruAb1_0790 hypothetical protein.	PFAM: Ubiquinol-cytochrome C chaperone; KEGG: mlo:mlr8420 hypothetical protein.	0.870
Meso_1144	infC	Meso_1144	Meso_0671	KEGG: bmb:BruAb1_0790 hypothetical protein.	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.802
Meso_1144	rplK	Meso_1144	Meso_1823	KEGG: bmb:BruAb1_0790 hypothetical protein.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.813
Meso_1144	rplM	Meso_1144	Meso_1164	KEGG: bmb:BruAb1_0790 hypothetical protein.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.805
Meso_1144	rplU	Meso_1144	Meso_3461	KEGG: bmb:BruAb1_0790 hypothetical protein.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.804
Meso_1144	rpmF	Meso_1144	Meso_3426	KEGG: bmb:BruAb1_0790 hypothetical protein.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ret:RHE_CH04015 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.875
Meso_1144	rpsB	Meso_1144	Meso_1381	KEGG: bmb:BruAb1_0790 hypothetical protein.	PFAM: ribosomal protein S2; KEGG: mlo:mll0651 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.804
Meso_1144	rpsC	Meso_1144	Meso_1672	KEGG: bmb:BruAb1_0790 hypothetical protein.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.878
Meso_1144	rpsF	Meso_1144	Meso_1916	KEGG: bmb:BruAb1_0790 hypothetical protein.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.811
Meso_1144	rpsP	Meso_1144	Meso_3339	KEGG: bmb:BruAb1_0790 hypothetical protein.	PFAM: ribosomal protein S16; KEGG: bmb:BruAb1_1803 RpsP, ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.822
infC	Meso_1144	Meso_0671	Meso_1144	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	KEGG: bmb:BruAb1_0790 hypothetical protein.	0.802
infC	rplK	Meso_0671	Meso_1823	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.896
infC	rplM	Meso_0671	Meso_1164	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.944
infC	rplU	Meso_0671	Meso_3461	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.899
infC	rpmF	Meso_0671	Meso_3426	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ret:RHE_CH04015 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.851
infC	rpsB	Meso_0671	Meso_1381	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	PFAM: ribosomal protein S2; KEGG: mlo:mll0651 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.985
infC	rpsC	Meso_0671	Meso_1672	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.983
infC	rpsF	Meso_0671	Meso_1916	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.972
infC	rpsP	Meso_0671	Meso_3339	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	PFAM: ribosomal protein S16; KEGG: bmb:BruAb1_1803 RpsP, ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.939