Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1193Putative phage repressor; PFAM: peptidase S24, S26A and S26B; KEGG: bja:blr6135 hypothetical protein. (230 aa)    
Predicted Functional Partners:
Meso_1231
KEGG: rsp:RSP_2351 hypothetical protein.
   
  
 0.836
Meso_1191
PFAM: protein of unknown function DUF955; KEGG: mag:amb3753 predicted Zn peptidase.
       0.769
Meso_1192
Hypothetical protein.
       0.762
Meso_1194
Hypothetical protein.
       0.561
Meso_1195
Hypothetical protein.
       0.550
Meso_3232
PFAM: protein of unknown function DUF167; KEGG: mlo:msl4154 hypothetical protein; Belongs to the UPF0235 family.
  
    0.400
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.