Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1276Transcriptional regulator, BolA protein family; PFAM: BolA-like protein; KEGG: mlo:msl0055 hypothetical protein; Belongs to the BolA/IbaG family. (77 aa)    
Predicted Functional Partners:
Meso_1273
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mlo:mll0053 monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.982
purL
Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]
       0.779
Meso_1781
Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD; KEGG: bmb:BruAb1_0940 hypothetical protein.
  
  
 0.711
Meso_3005
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 0.700
Meso_1410
PFAM: ferredoxin; KEGG: mlo:msl0793 ferredoxin.
   
 
 0.696
Meso_1005
KEGG: mlo:mll0920 hypothetical protein.
     
 0.684
Meso_1782
PFAM: aminotransferase, class V; KEGG: mlo:mlr0015 nitrogenase cofactor synthesis protein nifS.
     
 0.678
Meso_1779
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD; KEGG: mlo:mlr0020 hypothetical protein.
     
 0.662
Meso_1780
FeS assembly ATPase SufC; KEGG: mlo:mlr0019 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: ATPase.
     
  0.647
purQ
Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]
       0.635
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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