Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1322PFAM: Auxin Efflux Carrier; KEGG: mlo:mll1169 probable MdcF malonate transporter. (324 aa)    
Predicted Functional Partners:
Meso_1536
Malic enzyme, NAD-binding protein; PFAM: phosphate acetyl/butaryl transferase malic enzyme-like malic enzyme, NAD-binding; KEGG: mlo:mlr0809 malate dehydrogenase (decarboxylating).
  
  
 0.741
Meso_4030
PFAM: phosphate acetyl/butaryl transferase malic enzyme-like malic enzyme, NAD-binding; KEGG: mlo:mlr5329 NADP-dependent malic enzyme.
  
  
 0.741
Meso_1321
Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; KEGG: mlo:mlr1171 hypothetical protein.
       0.610
Meso_2162
TrkA-C; PFAM: Citrate transporter TrkA-C; KEGG: jan:Jann_3381 TrkA-like.
  
   0.571
Meso_1323
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mlo:mll1168 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.478
Meso_1320
PFAM: phosphopantetheine-binding; KEGG: ret:RHE_CH02478 acyl carrier protein.
       0.476
Meso_1319
PFAM: beta-ketoacyl synthase; KEGG: mlo:mlr1176 3-oxoacyl-(acyl carrier protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
    0.418
Meso_1318
PFAM: beta-ketoacyl synthase; KEGG: mlo:mlr1177 3-oxoacyl-acyl carrier protein synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
    0.413
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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