Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1377PFAM: protein of unknown function DUF482; KEGG: mlo:mlr0661 hypothetical protein. (397 aa)    
Predicted Functional Partners:
Meso_1379
PFAM: Endoribonuclease L-PSP; KEGG: mlo:mlr0658 hypothetical protein.
       0.743
Meso_1378
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mlo:mlr0660 probable phosphodiesterase.
       0.697
bpt
arginine-tRNA-protein transferase-like protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
 
     0.667
Meso_1376
PFAM: histidine triad (HIT) protein; KEGG: mlo:mlr0662 probable Hit-like protein involved in cell-cycle regulation.
       0.612
Meso_1557
PFAM: protein of unknown function DUF971; KEGG: mlo:mll0540 hypothetical protein.
  
     0.586
Meso_1380
KEGG: mlo:mll0656 hypothetical protein.
       0.547
Meso_1375
PFAM: glycosyl transferase, family 25; KEGG: atc:AGR_C_3310 glycosyl transferase, family 25.
       0.535
Meso_2115
KEGG: ath:At1g64980 expressed protein.
  
     0.446
Meso_0751
Redoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
 
     0.417
rpsB
PFAM: ribosomal protein S2; KEGG: mlo:mll0651 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
       0.401
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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