node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Meso_1826 | Meso_3606 | Meso_1826 | Meso_3606 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.874 |
Meso_1826 | rplA | Meso_1826 | Meso_1822 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.946 |
Meso_1826 | rplD | Meso_1826 | Meso_1677 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.953 |
Meso_1826 | rplS | Meso_1826 | Meso_3445 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.930 |
Meso_1826 | rplU | Meso_1826 | Meso_3461 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.944 |
Meso_1826 | rpsB | Meso_1826 | Meso_1381 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | PFAM: ribosomal protein S2; KEGG: mlo:mll0651 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.932 |
Meso_1826 | tsf | Meso_1826 | Meso_1382 | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.964 |
Meso_3606 | Meso_1826 | Meso_3606 | Meso_1826 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | TIGRFAM: translation elongation factor Tu small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding elongation factor Tu-like elongation factor Tu, domain 2; KEGG: bhe:BH10530 elongation factor tu (EF-tu). | 0.874 |
Meso_3606 | frr | Meso_3606 | Meso_1384 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.537 |
Meso_3606 | pyrH | Meso_3606 | Meso_1383 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.415 |
Meso_3606 | rplA | Meso_3606 | Meso_1822 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.958 |
Meso_3606 | rplD | Meso_3606 | Meso_1677 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.984 |
Meso_3606 | rplS | Meso_3606 | Meso_3445 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.962 |
Meso_3606 | rplU | Meso_3606 | Meso_3461 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.933 |
Meso_3606 | rpsB | Meso_3606 | Meso_1381 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: ribosomal protein S2; KEGG: mlo:mll0651 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.976 |
Meso_3606 | tsf | Meso_3606 | Meso_1382 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.948 |
Meso_3606 | tuf1 | Meso_3606 | Meso_1680 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.874 |
frr | Meso_3606 | Meso_1384 | Meso_3606 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.537 |
frr | pyrH | Meso_1384 | Meso_1383 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.970 |
frr | rplA | Meso_1384 | Meso_1822 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.960 |