Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1441KEGG: ret:RHE_CH03267 hemin transport system, hemin uptake protein. (65 aa)    
Predicted Functional Partners:
Meso_1442
PFAM: periplasmic binding protein; KEGG: sme:SMc01512 putative hemin binding periplasmic transmembrane protein.
     
 0.839
hmuV
ABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
       0.835
Meso_1443
PFAM: transport system permease protein; KEGG: mlo:mll1150 permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.827
Meso_1440
TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor TonB-dependent receptor, plug; KEGG: mlo:mlr1155 heme acquisition protein hasR.
  
  
 0.600
Meso_1437
KEGG: jan:Jann_2129 biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1.
  
  
 0.524
Meso_1439
KEGG: mlo:mlr1156 hypothetical protein.
       0.521
Meso_1436
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: jan:Jann_2128 hypothetical protein.
  
  
 0.519
Meso_1438
Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: jan:Jann_2130 MotA/TolQ/ExbB proton channel; TC 2.C.1.1.1.
  
  
 0.489
Meso_1435
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
    0.477
Meso_1433
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ret:RHE_CH03262 hypothetical protein.
       0.466
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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