Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1504PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_321 dipeptide transport system permease protein DppC. (289 aa)    
Predicted Functional Partners:
Meso_1506
PFAM: extracellular solute-binding protein, family 5; KEGG: psp:PSPPH_2786 ABC-transport protein, solute-binding component.
 
  0.925
Meso_1505
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_2679 binding-protein-dependent transport systems inner membrane component.
 
 
0.903
Meso_2382
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 dipeptide transport system permease protein dppB.
  
  0.862
Meso_2407
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1423 oligopeptide ABC transporter permease protein.
 
  0.862
Meso_2649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sdy:SDY_0756 putative transport system permease protein.
 
  0.862
Meso_3740
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO7564 putative oligopeptide ABC transporter integral membrane protein.
 
  0.862
Meso_1951
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1437 probable ABC transporter permease.
 
  0.861
Meso_3132
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC1241 oligopeptide ABC transporter permease.
 
  0.861
Meso_3642
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3342 ABC transporter permease protein.
 
  0.861
Meso_0075
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO7564 putative oligopeptide ABC transporter integral membrane protein.
 
  0.860
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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