Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Meso_1541PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll0800 putative ABC transport system ATP-binding protein. (278 aa)    
Predicted Functional Partners:
Meso_1540
Protein of unknown function DUF140; PFAM: Sulfate transporter/antisigma-factor antagonist STAS protein of unknown function DUF140; KEGG: mlo:mll0801 putative ABC transport system permease protein.
 
 0.999
Meso_1542
PFAM: Mammalian cell entry related; KEGG: mlo:mll0798 putative ABC transport system substrate-bindin protein.
 0.999
Meso_1543
ABC-type uncharacterized transport system auxiliary component-like protein; KEGG: mlo:mll0797 hypothetical protein.
 
    0.952
Meso_0131
PFAM: ABC-2 type transporter; KEGG: sme:SMb21205 putative ABC transporter permease protein.
   
  0.775
Meso_0132
PFAM: ABC-2 type transporter; KEGG: sme:SMb21204 putative ABC transporter permease protein.
   
  0.747
Meso_1539
PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: mlo:mlr0803 probable muconate cycloisomerase.
       0.577
nuoA
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.570
Meso_3668
PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll3197 ABC transporter ATP-binding protein (in RpoN upstream).
 
  
 
0.481
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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