Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1564TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein; TC 3.A.1.3.-. (265 aa)    
Predicted Functional Partners:
Meso_1562
PFAM: extracellular solute-binding protein, family 3; SMART: Ionotropic glutamate receptor; KEGG: bms:BR0955 amino acid ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.3.-.
 
 0.999
Meso_1563
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
 
 
0.984
Meso_0039
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV2984 putative arginine/ornithine transport protein, ATP-binding protein; TC 3.A.1.3.-.
 
 0.919
Meso_1116
PFAM: ABC transporter related; SMART: ATPase; KEGG: bmb:BruAb1_0762 amino acid ABC transporter, ATP-binding protein.
 
 
 0.918
Meso_3147
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV6281 putative ABC transporter ATP-binding protein - glutamine transport; TC 3.A.1.3.-.
 
 
 0.918
Meso_3975
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_L_381 glutamine ABC transporter, ATP-binding protein (glnQ); TC 3.A.1.3.-.
 
 
 0.918
Meso_1114
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02119 probable general L-amino acid transport permease ABC transporter protein.
  
  
 
0.897
Meso_1115
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2562 polar amino acid ABC transport permease protein aapM-1.
  
  
 
0.894
Meso_3976
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00161 probable amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
 
  
 
0.892
Meso_3978
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: Ionotropic glutamate receptor; KEGG: sme:SMa0082 putative ABC transporter, periplasmic solute-binding protein; TC 3.A.1.3.-.
 
 
 0.886
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.