Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1594Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00022 probable sugar ABC transporter, permease protein; TC 3.A.1.1.-. (288 aa)    
Predicted Functional Partners:
Meso_1592
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: mlo:mll0708 ATP-binding protein of sugar ABC transporter; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 0.996
Meso_1593
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll0706 ATP-binding protein of sugar ABC transporter; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 0.996
Meso_1595
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0704 permease protein of sugar ABC transporter; TC 3.A.1.1.-.
 
 0.993
Meso_1597
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc02514 putative multiple sugar transport system substrate-binding protein; TC 3.A.1.1.-.
 
 0.990
Meso_1596
KEGG: ret:RHE_PB00024 hypothetical protein.
 
    0.921
Meso_3773
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0851 putative multiple sugar transport system permease protein; TC 3.A.1.1.-.
 
 0.776
Meso_2303
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hma:rrnAC3195 sugar ABC transporter permease protein; TC 3.A.1.1.-.
 
 0.752
Meso_3557
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1444 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.
 
 0.749
Meso_1096
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3682 multiple sugar transport system permease protein; TC 3.A.1.1.-.
 
 0.736
Meso_3779
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll4924 sorbitol/mannitol transport inner membrane protein.
 
 0.722
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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