Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_1596KEGG: ret:RHE_PB00024 hypothetical protein. (93 aa)    
Predicted Functional Partners:
Meso_1595
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0704 permease protein of sugar ABC transporter; TC 3.A.1.1.-.
 
    0.963
Meso_1597
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc02514 putative multiple sugar transport system substrate-binding protein; TC 3.A.1.1.-.
 
     0.927
Meso_1594
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00022 probable sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
    0.921
Meso_1593
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll0706 ATP-binding protein of sugar ABC transporter; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
    0.920
Meso_1592
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: mlo:mll0708 ATP-binding protein of sugar ABC transporter; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
    0.918
Meso_1590
Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR Helix-turn-helix, type 11; KEGG: mlo:mll0711 glycerol-3-phosphate regulon repressor.
 
     0.677
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
    0.520
Meso_1591
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll0710 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.508
Meso_3714
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sil:SPO3664 hypothetical protein.
  
     0.423
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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