Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Meso_1607Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2593 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (326 aa)    
Predicted Functional Partners:
Meso_1608
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_L_2591 D-ribose transport system ATP-binding protein; TC 3.A.1.2.-.
 
 0.995
Meso_3705
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20856 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; TC 3.A.1.2.-.
 0.983
Meso_0265
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: sme:SMb20017 putative sugar ABC transporter ATP-binding protein ABC transporter; TC 3.A.1.2.-.
 0.981
Meso_0266
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: sme:SMb20018 putative sugar ABC transporter periplasmic sugar-binding protein ABC transporter; TC 3.A.1.2.-.
 
 0.981
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.981
Meso_1605
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: atc:AGR_L_2598 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.2.-.
 
 0.976
Meso_0839
PFAM: ABC transporter related; SMART: ATPase; KEGG: atu:Atu2347 ABC transporter, nucleotide binding/ATPase protein [sugar].
 0.902
Meso_3112
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mll3710 ABC-transport system ATP binding protein; TC 3.A.1.2.-.
 
 0.841
Meso_1606
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2595 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.800
Meso_1609
PFAM: aldo/keto reductase; KEGG: bja:blr1124 oxidoreductase.
       0.741
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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