Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_1610PFAM: amidohydrolase 2; KEGG: bja:blr1125 hypothetical protein. (288 aa)    
Predicted Functional Partners:
Meso_1609
PFAM: aldo/keto reductase; KEGG: bja:blr1124 oxidoreductase.
 
 0.995
Meso_1606
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2595 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
       0.595
Meso_1607
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2593 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
       0.595
Meso_1608
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_L_2591 D-ribose transport system ATP-binding protein; TC 3.A.1.2.-.
       0.595
Meso_3550
PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: mlo:mll7149 mandelate racemase.
 
   
 0.559
Meso_2301
Hypothetical protein; KEGG: bth:BT2458 putative pyridine nucleotide-disulphide oxidoreductase.
  
     0.538
Meso_1605
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: atc:AGR_L_2598 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.2.-.
 
     0.534
Meso_1074
PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: bja:blr6118 hypothetical protein.
 
   
 0.506
Meso_1071
PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: atc:AGR_L_2751 hypothetical protein.
 
   
 0.472
Meso_3970
PFAM: D-galactarate dehydratase/Altronate hydrolase-like; KEGG: atc:AGR_C_5115 probable D-galactarate dehydratase (GALCD).
 
     0.449
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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