Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_1625PFAM: Transglycosylase-associated protein; KEGG: mlo:msr0389 hypothetical protein. (84 aa)    
Predicted Functional Partners:
Meso_1623
PFAM: cyclase/dehydrase; KEGG: mlo:mlr0393 hypothetical protein.
       0.605
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.605
Meso_3342
PFAM: protein of unknown function DUF1236 protein of unknown function DUF1058 SH3, type 3; KEGG: ret:RHE_CH03012 hypothetical protein.
  
     0.601
Meso_1626
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase glucose-inhibited division protein A pyridine nucleotide-disulphide oxidoreductase dimerisation region FAD dependent oxidoreductase; KEGG: mlo:mlr0388 dihydrolipoamide dehydrogenase.
  
    0.582
Meso_1784
PFAM: protein of unknown function DUF1508; KEGG: ret:RHE_CH03509 hypothetical protein.
  
  
 0.566
Meso_1627
PFAM: lipolytic enzyme, G-D-S-L; KEGG: sme:SMc01033 probable arylesterase protein.
       0.565
Meso_3106
Response regulator receiver protein; KEGG: mlo:mlr3696 hypothetical protein.
  
    0.517
Meso_1629
Transketolase, central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
    0.512
Meso_3392
PFAM: protein of unknown function DUF1328; KEGG: mlo:msr4317 hypothetical protein.
  
    0.506
pdhA
Dehydrogenase, E1 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
    0.486
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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