Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1697TIGRFAM: hemimethylated DNA binding protein; KEGG: mlo:mlr0512 hypothetical protein. (110 aa)    
Predicted Functional Partners:
Meso_3355
KEGG: mlo:mlr4340 hypothetical protein.
 
     0.683
Meso_1696
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: mlo:mlr0511 probable 2-octaprenyl-6-methoxyphenol 4-monoxygenase.
  
    0.550
Meso_3951
PFAM: NLP/P60; KEGG: bmb:BruAb1_2152 NLP/P60 family protein.
  
   
 0.538
Meso_1005
KEGG: mlo:mll0920 hypothetical protein.
  
   
 0.525
Meso_0189
PFAM: Uncharacterised conserved protein UCP032146; KEGG: bmb:BruAb1_0279 hypothetical protein; Belongs to the UPF0262 family.
  
     0.474
Meso_1282
PFAM: protein of unknown function DUF1476; KEGG: mlo:mlr0071 hypothetical protein.
  
     0.423
Meso_0874
KEGG: bme:BMEI1361 hypothetical cytosolic protein.
  
     0.421
Meso_1695
CDP-diacylglycerol-choline O-phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.420
Meso_1346
KEGG: mlo:mlr0862 hypothetical protein.
  
     0.401
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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