Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Meso_1728KEGG: bmb:BruAb1_1264 hypothetical protein. (70 aa)    
Predicted Functional Partners:
Meso_1727
KEGG: mlo:mlr0180 ferripyochelin binding protein-like.
       0.686
Meso_1729
TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat serine acetyltransferase-like; KEGG: mlo:mlr0175 serine acetyltransferase.
       0.617
Meso_1118
KEGG: sme:SMc02115 hypothetical unknown protein.
 
     0.582
Meso_3317
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: mlo:mlr4475 putative DNA polymerase III, delta subunit.
  
     0.565
Meso_3180
PFAM: protein of unknown function DUF1465; KEGG: mlo:mll3903 hypothetical protein.
  
     0.489
Meso_2214
KEGG: mlo:mlr2817 hypothetical protein.
  
     0.481
Meso_3923
Transcriptional regulator, XRE family; PFAM: helix-turn-helix motif; KEGG: atc:AGR_C_630 hypothetical protein.
  
     0.469
Meso_3442
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.468
atpF1
H+-transporting two-sector ATPase, B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.464
Meso_1731
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr0170 hydrolase.
 
     0.464
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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