Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1841PFAM: regulatory proteins, IclR; KEGG: bja:blr3160 transcriptional regulatory protein. (261 aa)    
Predicted Functional Partners:
Meso_2307
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR Helix-turn-helix, type 11; KEGG: sma:SAV3701 putative IclR-family transcriptional regulator.
  
     0.772
Meso_3303
Transcriptional regulator, IclR family; PFAM: regulatory proteins, IclR Helix-turn-helix, type 11; KEGG: sth:STH2538 transcriptional regulator.
  
     0.752
Meso_1840
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mlo:mlr5680 DNA-damage-inducible protein.
       0.488
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.