Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1849PFAM: protein of unknown function DUF917; KEGG: mlo:mll9130 hypothetical protein. (361 aa)    
Predicted Functional Partners:
Meso_1851
PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: atc:AGR_L_3530 hypothetical protein.
     0.994
Meso_1850
PFAM: protein of unknown function DUF917; KEGG: atc:AGR_L_3528 hypothetical protein.
 
    
0.799
Meso_1852
PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_PC00012 probable NAD(P)H-dependent FMN reductase protein.
       0.705
Meso_1853
KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit.
       0.504
Meso_1854
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Sigma-70, region 4 type 2; KEGG: mta:Moth_0212 AroM.
 
     0.462
Meso_1848
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: bja:bll6415 transcriptional regulatory protein.
       0.449
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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