Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1852PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_PC00012 probable NAD(P)H-dependent FMN reductase protein. (190 aa)    
Predicted Functional Partners:
Meso_2961
PFAM: ABC transporter related; SMART: ATPase; KEGG: tfu:Tfu_1305 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component.
  
 
 0.929
Meso_1830
PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB0642 NADPH-dependent FMN reductase.
  
  
 
0.924
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
 
 0.921
Meso_2523
PFAM: flavin reductase-like, FMN-binding; KEGG: ret:RHE_PF00197 probable nitrilotriacetate monooxygenase component B protein.
 
  
  0.917
Meso_2963
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: bmb:BruAb2_0896 hypothetical ABC transporter, periplasmic binding protein.
  
 
  0.917
Meso_2964
KEGG: tfu:Tfu_1304 similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components.
  
 
  0.917
Meso_2962
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1306 ABC transporter, permease component.
  
 
  0.911
Meso_3991
PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region; KEGG: mlo:mll3230 sulfite reductase hemoprotein subunit.
   
 
 0.911
Meso_0424
FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; KEGG: mlo:mlr8243 riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.903
Meso_0405
PFAM: Rhodanese-like; KEGG: rpa:RPA3613 putative thiosulfate sulfurtransferase.
     
  0.900
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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