Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Meso_1853KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit. (456 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.908
Meso_1852
PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_PC00012 probable NAD(P)H-dependent FMN reductase protein.
 
 
 0.853
Meso_2581
PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
 
  
 0.850
Meso_1830
PFAM: NADPH-dependent FMN reductase; KEGG: bbr:BB0642 NADPH-dependent FMN reductase.
 
 
 0.824
Meso_1854
Transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR Sigma-70, region 4 type 2; KEGG: mta:Moth_0212 AroM.
   
   0.535
Meso_1849
PFAM: protein of unknown function DUF917; KEGG: mlo:mll9130 hypothetical protein.
       0.504
Meso_1850
PFAM: protein of unknown function DUF917; KEGG: atc:AGR_L_3528 hypothetical protein.
       0.504
Meso_1851
PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: atc:AGR_L_3530 hypothetical protein.
       0.504
Meso_0980
KEGG: mlo:mll7824 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase.
 
  
 0.414
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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