Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_1931PFAM: BFD-like [2Fe-2S]-binding region FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase. (477 aa)    
Predicted Functional Partners:
Meso_1839
PFAM: FAD dependent oxidoreductase; KEGG: bbr:BB0994 probable FAD dependent oxidoreductase.
  
  0.977
Meso_1932
KEGG: bja:bsl7192 putative sarcosine oxidase alpha subunit.
 
   
 0.951
Meso_1933
PFAM: FAD dependent oxidoreductase; KEGG: bja:bll7193 opine oxidase subunit B.
 
     0.947
Meso_1837
BFD-like (2Fe-2S)-binding region; PFAM: HI0933-like protein FAD dependent oxidoreductase BFD-like [2Fe-2S]-binding region FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase.
 
  
 
0.911
Meso_1479
Aminotransferase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase aminotransferase, class I and II; KEGG: mlo:mlr1282 aspartate transaminase.
  
 
 0.904
Meso_3963
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mlo:mll6778 arginase; Belongs to the arginase family.
     
  0.900
Meso_1930
PFAM: Endoribonuclease L-PSP; KEGG: bja:bll7189 hypothetical protein.
 
    0.868
Meso_0564
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mac:MA1318 argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
  
 
  0.804
Meso_1838
KEGG: bja:bsl7192 putative sarcosine oxidase alpha subunit.
 
   
 0.804
Meso_2366
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: reu:Reut_B3820 argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
  
 
  0.804
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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