Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Meso_1936KEGG: pae:PA0222 putative spermidine/putrescine transport system substrate-binding protein. (359 aa)    
Predicted Functional Partners:
Meso_1937
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6253 ABC transporter permease protein.
 
 0.972
Meso_1862
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP0414 polyamine ABC transporter, permease protein.
 
 0.761
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.722
Meso_2370
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3546 ABC transporter permease protein.
 
 0.691
Meso_3746
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi00400 putative spermidineputrescine ABC transporter permease protein; RBL01738.
 
 0.653
Meso_1938
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB1124 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.639
Meso_0166
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6537 ABC transporter, polyamine transport protein, permease protein.
  
 0.579
Meso_3958
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01474 ABC-type spermidine/putrescine transport system, permease component II.
  
 0.579
Meso_1863
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1234 motC.
 
 
 0.539
Meso_3745
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3517 ABC polyamine/opine transporter, inner membrane subunit.
 
 
 0.533
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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