STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Meso_1938PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB1124 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)    
Predicted Functional Partners:
Meso_1937
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6253 ABC transporter permease protein.
       0.774
Meso_0481
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ana:alr4455 6-oxocamphor hydrolase.
  
     0.757
Meso_3035
PFAM: 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mlo:mlr3490 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.733
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
  
 
 0.721
Meso_0090
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; KEGG: mlo:mll5691 two-component sensor histidine kinase.
  
 
 0.719
Meso_3680
Multi-sensor hybrid histidine kinase; KEGG: mlo:mlr3215 two-component sensor/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like PAS fold-4; SMART: PAS.
   
 
 0.709
Meso_0340
Periplasmic sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: bja:bll7016 two-component hybrid sensor and regulator.
   
 
 0.699
Meso_4076
Histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like; KEGG: mlo:mll8067 two-component sensor histidine kinase.
   
 
 0.699
Meso_4077
Putative PAS/PAC sensor protein; SMART: PAS; KEGG: sco:SCO3691 regulatory protein.
   
 
 0.699
Meso_1940
PFAM: MaoC-like dehydratase; KEGG: mag:amb0831 acyl dehydratase.
 
 0.698
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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