Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Meso_2029Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: mlo:mll1589 transcriptional regulator. (337 aa)    
Predicted Functional Partners:
Meso_2580
TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase AMP-dependent synthetase and ligase acyl transferase region condensation domain aminotransferase class-III phosphopantetheine-binding; KEGG: rpa:RPA3339 possible polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.932
Meso_2028
TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: mlo:mll1587 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
  
 0.876
Meso_2581
PFAM: condensation domain phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
    
 0.865
Meso_2030
KEGG: mlo:mlr1592 hypothetical protein.
 
     0.698
Meso_0980
KEGG: mlo:mll7824 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthetase.
    
 0.604
Meso_0871
PFAM: ROSMUCR transcriptional regulator; KEGG: mlo:mlr7645 transcriptional regulator.
  
   
 0.518
Meso_2162
TrkA-C; PFAM: Citrate transporter TrkA-C; KEGG: jan:Jann_3381 TrkA-like.
  
  
 0.504
Meso_3488
Transcriptional regulator, XRE family; PFAM: helix-turn-helix motif; KEGG: mlo:mlr4548 transcriptional regulator.
  
  
 0.500
Meso_1143
PFAM: Ubiquinol-cytochrome C chaperone; KEGG: mlo:mlr8420 hypothetical protein.
  
     0.458
Meso_1942
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ppu:PP3761 sensor histidine kinase/response regulator.
  
  
 0.456
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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